Browse of TCMCG029C09777 protein

CDS

Accession Number	TCMCG029C09777
gbkey	CDS
Protein Id	XP_023755577.1
Location	complement(join(1748945..1749059,1749167..1749723,1750320..1750496,1750576..1750707,1750786..1751007,1751092..1751169,1751264..1751329,1751423..1751503,1751597..1752321,1752658..1752857,1752927..1753021,1753102..1753239,1753351..1753428,1753549..1753677,1754781..1755023,1755097..1755148,1755226..1755506,1755616..1755761,1755863..1755995,1756084..1756237,1756562..1756714,1756942..1757279))
Gene	LOC111904029
GeneID	111904029
Organism	Lactuca sativa

Protein

Length	1430aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA432228
db_source	XM_023899809.1
Definition	cleavage and polyadenylation specificity factor subunit 1 [Lactuca sativa]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGCTACGCAGCGTACAAATTGATGCACCCGCCCACCGGAATCGACAACTGCGCTTCGGGATTCATCACGCATTCTCCCGCCGACTTCGCTTCCCGCATTCTCCCGGTTCCTACTGACGATATCGACCCCGTCTGGCCCTCCACTCCGACTCCAGGTGTTGGTCCTATCCCAAACCTCATCGTGACCGCAGCCAATGTTCTTGAAGTATACACCGTTAGGGTTCAAGAAGACGGTAATAGTACTAATAAGGATTCTAGCACCGTATCTCAACCACAGCGTGGCGGCGTCATGGCAGGTCTCTCTGGTGCTTCACTAGAACTCGTTTGTAGTTACAGGTTGCACGGCAACGTGGAATCAGTGGGTGTGCTGTCTTCTGGAGCAGAGGAGCGGACAAGTGGTAGAAGAAGAGATTCTATCATCTTAACATTTGAAGATGCAAAAATCTCTATTCTAGAATTTGATGATTCAGTTTATGGACTTAGGACAAGTTCAATGCACTGCTTTGAGGGTCCACAGTGGGTTCATTTGAAAAAGGGCAGAGAATCTTTTGCCAGAGGGCCGTTCATCAAAGTTGATCCTCTAGGCAGGTGTGCAGGGGTACTTGTTTATGGCCTACAAATGATAATACTCAAAGCTGCTGAGGCTGGTGGTTTGGTGGGAGATGATGGTGGTTCTAGTGGTGGAGGCTCAGTTTCTGCACGTATACAATCATCATATATGATTAGTTTACGGGAGTTGGATGTCAAACATGTCAAGGATTTTATCTTTGTTCATGGTTACATTGAACCTGTTTTGGTCATCCTTCATGAGAAAGAACTCACTTGGGCTGGGCGCCTGCCACATAAGCATCATACCTGTATGATTTCTGCACTTAGTATCAGTACCACTTTGAAGCAGCATCCACTCATATGGTCTGCCACTAATCTTCCACATGATGCATATAAGCTTCTTGCTGTGCCCTCTCCAATTGGTGGAGTTCTTGTAGTTTGTGCAAATACAATTCATTATCATAGCCAGTCAGCATCATGCATATTGGCTTTGAATAATTATGCTGTTCCCATGGATAGCAGTCAGGAGATGTCAAGATCAAGTTTCAGTGTGGAGCTTGATGCTGCAAATGCAACTTGGATATCAAATGATGTTGCCATGCTGTCAACAAAATCCGGTGAACTACTTTTGTTGACACTTGTACATGATGGCCGTATGGTGCAGAAACTTGACCTTTCCAAATCTAAAGCTTCAGTATTAACTTCGGGAATTACTACTGTTGGAAGCTCTTTCTTCTTCTTAGGAAGTCGTTTAGGAGATAGTTTGCTAGTGCAGTTCCATTGTGGGGCAGGGTCTTCTATTGCAAAGGAAGAGGTTGGTGATATTGAAGGCGATGTTCCATTAACAAAACGATTAAGAAGATCTTCCTCTGATGCTTTGCAAGATTTGGCAAATGATGATGAACTTTCCTTGTATGGGTCAGATCTGAACAATGCCCAGTCTGCCCAGAAAACATTCTCGTTTACTGTAAGGGACTCATTGATTAATGTTGGCCCCTTGAAAGACTTCTCTTATGGTTCAAGAATGAATGCTGATCCAAATGCTACAGGGGTTGCTAAACAAAGTAATTATGAACTTGTGTGCTGTTCTGGTCATGGAAAGAATGGCTCTCTCTGTGTGCTTCAACAATCTATCCGTCCAGAAATTATCACCCAGGAAGCTATACCAGGTTGCAAGGGGCTTTGGACTGTCTACCACAAAAATTCACGCAATCAACCTGAACATTTGAAAACAGCATCTGAAGATGATGAGTATCATGCATATTTAATCATCAGTTTGGAAAGTCGAACAATGGTATTGCAGACTGTTAATAATCTTGAAGAGGTGACTGAAAATGTTGATTACTTTGTTCAAGGAAGTACCATTTATGCTGGGAATCTTTTTGGAAGGAGGCGAGTCATACAAGTGTACGCTCGTGGTGCTCGAATTCTTGATGGTGCTTTCATGACTCAAGAACTAAACTTCCGACCTGCAAATTCTGAAACTGCTGCAACTTCTCCCAATTCTTCCTCAGTGGCATCCGTCTCCATTGCTGATCCGTATGTATTATTGATGATGACAGATGGAAGTATTCAGCTTCTTGTTGGAGACCCCTTGACATGCACCATGAGTATCAACAATTTGGCTGCATTTCAGAGCTCCAAGAAAGCGATAGCTTGCTGTACACTGTATCACGATAGAGGAACAGAGCCATGGCTAAGAAAGACAAGTACAGATGCTTGGCTTTTGACAGGTGTCAGTGAGGCAATTGAAGGACCCGATGGAACACCTCAGGATCAAGGCGATATATACTGCGTAGTCTGTTATGAAAGCGGCTCACTCGAAATATACGATGTCCCAGTTTTCTCTTGTGTTTTTTCGGTTGACAGCTTTGTTTCCGGAAGAATCTTTCTCGGAGACAACTTATCCCAGGAACCTTCCAACGATAGTCACAACATCAACATGAAGGTTGTTGAATTGGCCATGCACAGGTGGCCAGGGGACCACAGCCGCCCTTTTCTGTTTGGAATCTTGGCTGATGGGACGATTCTTTGCTATCATGCTTACTTGTATGAAGGAGGTTCCGAAAATGCTTCTAGAAGTGAAGTGGTTTCTTCTGTTGAAACCTCTTCATCCAACCCTTCAAGGCTTAAGAATTTGAGATTTTCACGTGTTTCTTTGGATACATACACAAGAGAAGAGATGTCAACAGAAACCCCGTTTCCAAGAATAACAATGTTTAAAAATGTTGGTGGTCACCCTGGGTTCTTCCTCTCCGGTTCAAGACCTGCCTGGTTTATGAAATTTAGAGAGCGGATTCGAATCCATCCCCAGCTTTGTGATGGATCGATTATTGCCTTCACGGTTCTTCATAACATGTACTGTAACCATGGGTTCATTTATGTTACCTCACAGGGTACATTGAAGATCTGCCAACTTCCATCTTTGCTATCATATGACAACTATTGGCCAGTACAAAAGATTCCTTTGAAGGCCACTCCACATCAAGTAACATACTTTGCCGAGAAGAACTTATACCCGCTTATAGTTTCTGTTCCTGTGGTAAAGCCTATAAACCAAGTCCTATCATCTATGGTTGATCAAGAATCTGGTCACCAAATCGAGCATGATGTTTCAAATCTTGATGGTACTTATACCGTAGAAGAATTCGAGGTCCGGATTTTGGAACCAGAAAGTTCTGGTGGGCCATGGCAAACTAAAGGAACAATCCGCATGCAAACTACTGAAAATGCACTAACTGTGCGAGTCGTTACATTATCTAATACAACAACCAGAGAAAACGTAACACTTTTGGCGATAGGGACAGCTTATGTGCAAGGGGAGGACGTGGCTGCAAGAGGGCGTGTTCTTTTGTTTTCTGTTGAAAGTAGCACTGAAGTATCACAGCCAGCGGTTACAGAGGTATACTCCAAAGAAATGAAAGGTGCCATATCAGCTCTAGCTTCAATTCAAGGCTATTTGTTAGTAGCTTCGGGCCCCAAAGTTATTCTACACAAATGGACAGGTACCGAGTTGAGTGGGGTCGCTTTCTTTGATGCTCCACCACTCTATGTAGTCAGCTTAAATATTGTAAAAAATTTCATTCTGCTTGGGGATATCCACAAAAGCATATATTTCCTAAGTTGGAAAGAACAAGGATCTCAACTAAGTCTACTAGCAAAAGATTTCGGATCCCTGGATTGTTTGGCAACAGAGTTTCTAATCGACGGAAGCACCCTAAGTCTGATGGTCTCGGATGACCAAAAAAACGTACAAATATTCTATTACGCACCAAAAGTCTCCGAGAGCTGGAAAGGCCAGAAGCTTCTTTCTCGGGCAGAGTTTCATGTCGGGGCCCACGTCACCAAATTTCTACGCTTACAGATGCTTCCAACCTCCAACTCCTCTCCATCAGATAAAACCAACCGTTTTGCACTTGTGTTTGGGACCTTGGATGGGAGCATCGGGTGTATTGCGCCTCTTGATGAGCTGACTTTTAGGAGGCTTCAGTCTCTGCAGAAAAAACTAGTGGATGCTGTTCCTCATGTTGCTGGTTTGAATCCCAGATCTTTTCGCCACTTCCATTCCAATGGAAAGGCTCATCGCCCTGGCCCTGATACCATTGTTGATGCTGAACTCCTCTGCCATTATGATATGCTGCCTTTTGAACATCAGCTTGAGATTGCAAACCAGATTGGGACAACACGTTCTCAGATCATTTCCAATTTAAATGACCTGGCTCTTGGTACTAGCTTCTTGTGA

Protein:   MSYAAYKLMHPPTGIDNCASGFITHSPADFASRILPVPTDDIDPVWPSTPTPGVGPIPNLIVTAANVLEVYTVRVQEDGNSTNKDSSTVSQPQRGGVMAGLSGASLELVCSYRLHGNVESVGVLSSGAEERTSGRRRDSIILTFEDAKISILEFDDSVYGLRTSSMHCFEGPQWVHLKKGRESFARGPFIKVDPLGRCAGVLVYGLQMIILKAAEAGGLVGDDGGSSGGGSVSARIQSSYMISLRELDVKHVKDFIFVHGYIEPVLVILHEKELTWAGRLPHKHHTCMISALSISTTLKQHPLIWSATNLPHDAYKLLAVPSPIGGVLVVCANTIHYHSQSASCILALNNYAVPMDSSQEMSRSSFSVELDAANATWISNDVAMLSTKSGELLLLTLVHDGRMVQKLDLSKSKASVLTSGITTVGSSFFFLGSRLGDSLLVQFHCGAGSSIAKEEVGDIEGDVPLTKRLRRSSSDALQDLANDDELSLYGSDLNNAQSAQKTFSFTVRDSLINVGPLKDFSYGSRMNADPNATGVAKQSNYELVCCSGHGKNGSLCVLQQSIRPEIITQEAIPGCKGLWTVYHKNSRNQPEHLKTASEDDEYHAYLIISLESRTMVLQTVNNLEEVTENVDYFVQGSTIYAGNLFGRRRVIQVYARGARILDGAFMTQELNFRPANSETAATSPNSSSVASVSIADPYVLLMMTDGSIQLLVGDPLTCTMSINNLAAFQSSKKAIACCTLYHDRGTEPWLRKTSTDAWLLTGVSEAIEGPDGTPQDQGDIYCVVCYESGSLEIYDVPVFSCVFSVDSFVSGRIFLGDNLSQEPSNDSHNINMKVVELAMHRWPGDHSRPFLFGILADGTILCYHAYLYEGGSENASRSEVVSSVETSSSNPSRLKNLRFSRVSLDTYTREEMSTETPFPRITMFKNVGGHPGFFLSGSRPAWFMKFRERIRIHPQLCDGSIIAFTVLHNMYCNHGFIYVTSQGTLKICQLPSLLSYDNYWPVQKIPLKATPHQVTYFAEKNLYPLIVSVPVVKPINQVLSSMVDQESGHQIEHDVSNLDGTYTVEEFEVRILEPESSGGPWQTKGTIRMQTTENALTVRVVTLSNTTTRENVTLLAIGTAYVQGEDVAARGRVLLFSVESSTEVSQPAVTEVYSKEMKGAISALASIQGYLLVASGPKVILHKWTGTELSGVAFFDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCLATEFLIDGSTLSLMVSDDQKNVQIFYYAPKVSESWKGQKLLSRAEFHVGAHVTKFLRLQMLPTSNSSPSDKTNRFALVFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDAVPHVAGLNPRSFRHFHSNGKAHRPGPDTIVDAELLCHYDMLPFEHQLEIANQIGTTRSQIISNLNDLALGTSFL